Publications

Motif

  • Mitoyen, C., Quigley, C., Boehly, T. & Fusani L. Female behaviour is differentially associated with specific components of multimodal courtship in ring doves. Animal Behaviour (2021). https://doi.org/10.1016/j.anbehav.2020.12.014
  • Revilla-i-Domingo, R., Rajan, V. B. V., Waldherr, M., Prohaczka, G., Musset, H., Orel, L., Gerrard, E., Smolka, M., Farlik, M., Lucas, R. J., Raible, F. & Tessmar-Raible K. Analyses of Cephalic and Non-cephalic Sensory Cell Types Provide Insight into Joint Photo- and Mechanoreceptor Evolution. Life Science Weekly (2021). https://doi.org/10.1101/2021.01.10.426124
  • Rajan, V., Babu, V., Häfker, N. S., Arboleda, E., Poehn, B., Gossenreiter, T., Gerrard, E., Hofbauer, M., Mühlestein, C., Bileck, A., Gerner, C., Ribera D'Alcala, M., Buia, M. C., Hartl, M., Lucas, R. J. & Tessmar-Raible, K. Seasonal variation in UVA light drives hormonal and behavioural changes in a marine annelid via a ciliary opsin. Nature Ecology & Evolution (2021). https://doi.org/10.1038/s41559-020-01356-1
  • Fontinha, B. M., Zekoll, T., Al-Rawi, M., Gallach, M., Reithofer, F., Barker, A. J., Hofbauer, M., Fischer, R. M., Von Haeseler, A., Baier, H. & Tessmar-Raible, K. TMT-Opsins differentially modulate medaka brain function in a context-dependent manner. PLoS Biology (2021). https://doi.org/10.1371/journal.pbio.3001012
  • Günzel, Y., McCollum, J., Paoli, M., Galizia, C. G., Petelski, I. & Couzin-Fuchs E. Social modulation of individual preferences in cockroaches. IScience (2020). https://doi.org/10.1016/j.isci.2020.101964
  • Li, L., Nagy, M., Graving, J. M., Bak-Coleman, J., Xie, G. & Couzin, I. D. Vortex phase matching as a strategy for schooling in robots and in fish Nature Communications (2020). https://doi.org/10.1038/s41467-020-19086-0
  • Graving, J. M., Chae, D., Naik, H., Li, L., Koger, B., Costelloe, B. R. & Couzin, I. D. DeepPoseKit, a software toolkit for fast and robust animal pose estimation using deep learning. ELife (2019). https://doi.org/10.7554/eLife.47994
  • Graving, J. M., Chae, D., Naik, H., Li, L., Koger, B., Costelloe, B. R. & Couzin, I. D. Fast and robust animal pose estimation. BioRxiv (2019). https://doi.org/10.1101/620245
  • Ayers, T. Non-visual photoreception by G [tief]○-type opsin in the annelid Platynereis dumerilii. (University of Vienna. Zentrum für Molekulare Biologie, 2018). https://doi.org/10.25365/thesis.54364
  • Rodin, B. Ispitivanje uloge L-tipa Kriptokoroma na cirkalunarno i svjetlom uvjetovano ponašanje u morskom kolutićavom crvu Platynereis dumerilii (University of Rijeka, 2018). https://urn.nsk.hr/urn:nbn:hr:193:700539

Loopy

  • Mitoyen, C., Quigley, C., Boehly, T. & Fusani L. Female behaviour is differentially associated with specific components of multimodal courtship in ring doves. Animal Behaviour (2021). https://doi.org/10.1016/j.anbehav.2020.12.014
  • Revilla-i-Domingo, R., Rajan, V. B. V., Waldherr, M., Prohaczka, G., Musset, H., Orel, L., Gerrard, E., Smolka, M., Farlik, M., Lucas, R. J., Raible, F. & Tessmar-Raible K. Analyses of Cephalic and Non-cephalic Sensory Cell Types Provide Insight into Joint Photo- and Mechanoreceptor Evolution. Life Science Weekly (2021). https://doi.org/10.1101/2021.01.10.426124
  • Rajan, V., Babu, V., Häfker, N. S., Arboleda, E., Poehn, B., Gossenreiter, T., Gerrard, E., Hofbauer, M., Mühlestein, C., Bileck, A., Gerner, C., Ribera D'Alcala, M., Buia, M. C., Hartl, M., Lucas, R. J. & Tessmar-Raible, K. Seasonal variation in UVA light drives hormonal and behavioural changes in a marine annelid via a ciliary opsin. Nature Ecology & Evolution (2021). https://doi.org/10.1038/s41559-020-01356-1
  • Kil, N., Ertelt, K. & Auer, U. Development and Validation of an Automated Video Tracking Model for Stabled Horses. Animals (2020). https://doi.org/10.3390/ani10122258
  • Günzel, Y., McCollum, J., Paoli, M., Galizia, C. G., Petelski, I. & Couzin-Fuchs E. Social modulation of individual preferences in cockroaches. IScience (2020). https://doi.org/10.1016/j.isci.2020.101964
  • Ayers, T. Non-visual photoreception by G [tief]○-type opsin in the annelid Platynereis dumerilii. (University of Vienna. Zentrum für Molekulare Biologie, 2018). https://doi.org/10.25365/thesis.54364
  • Rodin, B. Ispitivanje uloge L-tipa Kriptokoroma na cirkalunarno i svjetlom uvjetovano ponašanje u morskom kolutićavom crvu Platynereis dumerilii (University of Rijeka, 2018). https://urn.nsk.hr/urn:nbn:hr:193:700539

VR

  • Schell, B. R. Employing virtual reality to reveal individual locusts' decision-making. (University of Konstanz, 2020). http://nbn-resolving.de/urn:nbn:de:bsz:352-2-d7hoztrcxjqb1
  • Naik, H., Bastien, R., Navab, N. & Couzin, I. D. Animals in Virtual Environments. arXiv (2019). https://doi.org/10.1109/TVCG.2020.2973063
  • Chouinard-Thuly, L., Gierszewski, S., Rosenthal, G. G., Reader, S. M., Rieucau, G., Woo, K. L., Gerlai, R., Tedore, C., J. I., Spencer , Stowers, J. R., Frommen, J. G., Dolins, F. L. & Witte, K. Technical and conceptual considerations for using animated stimuli in studies of animal behavior. Current Zoology (2017). https://doi.org/10.1093/cz/zow104
  • Stowers, J. R., Hofbauer, M., Bastien, R., Griessner, J., Higgins, P., Farooqui, S., Fischer, R. M., Nowikovsky, K., Haubensak, W., Couzin, I. D., Tessmar-Raible, K. & Straw, A. D. Virtual reality for freely moving animals. Nature Methods (2017). https://doi.org/10.1038%2Fnmeth.4399
  • Stowers, J. R., Fuhrmann, A., Hofbauer, M., Streinzer, M., Schmid, A., Dickinson, M. H. & Straw, A. D. Reverse engineering animal vision with virtual reality and genetics. IEEE Computer (2014). https://doi.org/10.1109/MC.2014.190

General

  • Bath, D. E., Stowers, J. R., Hörmann, D., Poehlmann, A., Dickson, B. J. & Straw, A. D. FlyMAD: rapid thermogenetic control of neuronal activity in freely walking Drosophila Nature Methods (2014). https://doi.org/10.1038/nmeth.2973